cart-elc

Source code for CART-ELC
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LLT.h (18760B)


      1 // This file is part of Eigen, a lightweight C++ template library
      2 // for linear algebra.
      3 //
      4 // Copyright (C) 2008 Gael Guennebaud <gael.guennebaud@inria.fr>
      5 //
      6 // This Source Code Form is subject to the terms of the Mozilla
      7 // Public License v. 2.0. If a copy of the MPL was not distributed
      8 // with this file, You can obtain one at http://mozilla.org/MPL/2.0/.
      9 
     10 #ifndef EIGEN_LLT_H
     11 #define EIGEN_LLT_H
     12 
     13 namespace Eigen {
     14 
     15 namespace internal{
     16 
     17 template<typename _MatrixType, int _UpLo> struct traits<LLT<_MatrixType, _UpLo> >
     18  : traits<_MatrixType>
     19 {
     20   typedef MatrixXpr XprKind;
     21   typedef SolverStorage StorageKind;
     22   typedef int StorageIndex;
     23   enum { Flags = 0 };
     24 };
     25 
     26 template<typename MatrixType, int UpLo> struct LLT_Traits;
     27 }
     28 
     29 /** \ingroup Cholesky_Module
     30   *
     31   * \class LLT
     32   *
     33   * \brief Standard Cholesky decomposition (LL^T) of a matrix and associated features
     34   *
     35   * \tparam _MatrixType the type of the matrix of which we are computing the LL^T Cholesky decomposition
     36   * \tparam _UpLo the triangular part that will be used for the decompositon: Lower (default) or Upper.
     37   *               The other triangular part won't be read.
     38   *
     39   * This class performs a LL^T Cholesky decomposition of a symmetric, positive definite
     40   * matrix A such that A = LL^* = U^*U, where L is lower triangular.
     41   *
     42   * While the Cholesky decomposition is particularly useful to solve selfadjoint problems like  D^*D x = b,
     43   * for that purpose, we recommend the Cholesky decomposition without square root which is more stable
     44   * and even faster. Nevertheless, this standard Cholesky decomposition remains useful in many other
     45   * situations like generalised eigen problems with hermitian matrices.
     46   *
     47   * Remember that Cholesky decompositions are not rank-revealing. This LLT decomposition is only stable on positive definite matrices,
     48   * use LDLT instead for the semidefinite case. Also, do not use a Cholesky decomposition to determine whether a system of equations
     49   * has a solution.
     50   *
     51   * Example: \include LLT_example.cpp
     52   * Output: \verbinclude LLT_example.out
     53   *
     54   * \b Performance: for best performance, it is recommended to use a column-major storage format
     55   * with the Lower triangular part (the default), or, equivalently, a row-major storage format
     56   * with the Upper triangular part. Otherwise, you might get a 20% slowdown for the full factorization
     57   * step, and rank-updates can be up to 3 times slower.
     58   *
     59   * This class supports the \link InplaceDecomposition inplace decomposition \endlink mechanism.
     60   *
     61   * Note that during the decomposition, only the lower (or upper, as defined by _UpLo) triangular part of A is considered.
     62   * Therefore, the strict lower part does not have to store correct values.
     63   *
     64   * \sa MatrixBase::llt(), SelfAdjointView::llt(), class LDLT
     65   */
     66 template<typename _MatrixType, int _UpLo> class LLT
     67         : public SolverBase<LLT<_MatrixType, _UpLo> >
     68 {
     69   public:
     70     typedef _MatrixType MatrixType;
     71     typedef SolverBase<LLT> Base;
     72     friend class SolverBase<LLT>;
     73 
     74     EIGEN_GENERIC_PUBLIC_INTERFACE(LLT)
     75     enum {
     76       MaxColsAtCompileTime = MatrixType::MaxColsAtCompileTime
     77     };
     78 
     79     enum {
     80       PacketSize = internal::packet_traits<Scalar>::size,
     81       AlignmentMask = int(PacketSize)-1,
     82       UpLo = _UpLo
     83     };
     84 
     85     typedef internal::LLT_Traits<MatrixType,UpLo> Traits;
     86 
     87     /**
     88       * \brief Default Constructor.
     89       *
     90       * The default constructor is useful in cases in which the user intends to
     91       * perform decompositions via LLT::compute(const MatrixType&).
     92       */
     93     LLT() : m_matrix(), m_isInitialized(false) {}
     94 
     95     /** \brief Default Constructor with memory preallocation
     96       *
     97       * Like the default constructor but with preallocation of the internal data
     98       * according to the specified problem \a size.
     99       * \sa LLT()
    100       */
    101     explicit LLT(Index size) : m_matrix(size, size),
    102                     m_isInitialized(false) {}
    103 
    104     template<typename InputType>
    105     explicit LLT(const EigenBase<InputType>& matrix)
    106       : m_matrix(matrix.rows(), matrix.cols()),
    107         m_isInitialized(false)
    108     {
    109       compute(matrix.derived());
    110     }
    111 
    112     /** \brief Constructs a LLT factorization from a given matrix
    113       *
    114       * This overloaded constructor is provided for \link InplaceDecomposition inplace decomposition \endlink when
    115       * \c MatrixType is a Eigen::Ref.
    116       *
    117       * \sa LLT(const EigenBase&)
    118       */
    119     template<typename InputType>
    120     explicit LLT(EigenBase<InputType>& matrix)
    121       : m_matrix(matrix.derived()),
    122         m_isInitialized(false)
    123     {
    124       compute(matrix.derived());
    125     }
    126 
    127     /** \returns a view of the upper triangular matrix U */
    128     inline typename Traits::MatrixU matrixU() const
    129     {
    130       eigen_assert(m_isInitialized && "LLT is not initialized.");
    131       return Traits::getU(m_matrix);
    132     }
    133 
    134     /** \returns a view of the lower triangular matrix L */
    135     inline typename Traits::MatrixL matrixL() const
    136     {
    137       eigen_assert(m_isInitialized && "LLT is not initialized.");
    138       return Traits::getL(m_matrix);
    139     }
    140 
    141     #ifdef EIGEN_PARSED_BY_DOXYGEN
    142     /** \returns the solution x of \f$ A x = b \f$ using the current decomposition of A.
    143       *
    144       * Since this LLT class assumes anyway that the matrix A is invertible, the solution
    145       * theoretically exists and is unique regardless of b.
    146       *
    147       * Example: \include LLT_solve.cpp
    148       * Output: \verbinclude LLT_solve.out
    149       *
    150       * \sa solveInPlace(), MatrixBase::llt(), SelfAdjointView::llt()
    151       */
    152     template<typename Rhs>
    153     inline const Solve<LLT, Rhs>
    154     solve(const MatrixBase<Rhs>& b) const;
    155     #endif
    156 
    157     template<typename Derived>
    158     void solveInPlace(const MatrixBase<Derived> &bAndX) const;
    159 
    160     template<typename InputType>
    161     LLT& compute(const EigenBase<InputType>& matrix);
    162 
    163     /** \returns an estimate of the reciprocal condition number of the matrix of
    164       *  which \c *this is the Cholesky decomposition.
    165       */
    166     RealScalar rcond() const
    167     {
    168       eigen_assert(m_isInitialized && "LLT is not initialized.");
    169       eigen_assert(m_info == Success && "LLT failed because matrix appears to be negative");
    170       return internal::rcond_estimate_helper(m_l1_norm, *this);
    171     }
    172 
    173     /** \returns the LLT decomposition matrix
    174       *
    175       * TODO: document the storage layout
    176       */
    177     inline const MatrixType& matrixLLT() const
    178     {
    179       eigen_assert(m_isInitialized && "LLT is not initialized.");
    180       return m_matrix;
    181     }
    182 
    183     MatrixType reconstructedMatrix() const;
    184 
    185 
    186     /** \brief Reports whether previous computation was successful.
    187       *
    188       * \returns \c Success if computation was successful,
    189       *          \c NumericalIssue if the matrix.appears not to be positive definite.
    190       */
    191     ComputationInfo info() const
    192     {
    193       eigen_assert(m_isInitialized && "LLT is not initialized.");
    194       return m_info;
    195     }
    196 
    197     /** \returns the adjoint of \c *this, that is, a const reference to the decomposition itself as the underlying matrix is self-adjoint.
    198       *
    199       * This method is provided for compatibility with other matrix decompositions, thus enabling generic code such as:
    200       * \code x = decomposition.adjoint().solve(b) \endcode
    201       */
    202     const LLT& adjoint() const EIGEN_NOEXCEPT { return *this; };
    203 
    204     inline EIGEN_CONSTEXPR Index rows() const EIGEN_NOEXCEPT { return m_matrix.rows(); }
    205     inline EIGEN_CONSTEXPR Index cols() const EIGEN_NOEXCEPT { return m_matrix.cols(); }
    206 
    207     template<typename VectorType>
    208     LLT & rankUpdate(const VectorType& vec, const RealScalar& sigma = 1);
    209 
    210     #ifndef EIGEN_PARSED_BY_DOXYGEN
    211     template<typename RhsType, typename DstType>
    212     void _solve_impl(const RhsType &rhs, DstType &dst) const;
    213 
    214     template<bool Conjugate, typename RhsType, typename DstType>
    215     void _solve_impl_transposed(const RhsType &rhs, DstType &dst) const;
    216     #endif
    217 
    218   protected:
    219 
    220     static void check_template_parameters()
    221     {
    222       EIGEN_STATIC_ASSERT_NON_INTEGER(Scalar);
    223     }
    224 
    225     /** \internal
    226       * Used to compute and store L
    227       * The strict upper part is not used and even not initialized.
    228       */
    229     MatrixType m_matrix;
    230     RealScalar m_l1_norm;
    231     bool m_isInitialized;
    232     ComputationInfo m_info;
    233 };
    234 
    235 namespace internal {
    236 
    237 template<typename Scalar, int UpLo> struct llt_inplace;
    238 
    239 template<typename MatrixType, typename VectorType>
    240 static Index llt_rank_update_lower(MatrixType& mat, const VectorType& vec, const typename MatrixType::RealScalar& sigma)
    241 {
    242   using std::sqrt;
    243   typedef typename MatrixType::Scalar Scalar;
    244   typedef typename MatrixType::RealScalar RealScalar;
    245   typedef typename MatrixType::ColXpr ColXpr;
    246   typedef typename internal::remove_all<ColXpr>::type ColXprCleaned;
    247   typedef typename ColXprCleaned::SegmentReturnType ColXprSegment;
    248   typedef Matrix<Scalar,Dynamic,1> TempVectorType;
    249   typedef typename TempVectorType::SegmentReturnType TempVecSegment;
    250 
    251   Index n = mat.cols();
    252   eigen_assert(mat.rows()==n && vec.size()==n);
    253 
    254   TempVectorType temp;
    255 
    256   if(sigma>0)
    257   {
    258     // This version is based on Givens rotations.
    259     // It is faster than the other one below, but only works for updates,
    260     // i.e., for sigma > 0
    261     temp = sqrt(sigma) * vec;
    262 
    263     for(Index i=0; i<n; ++i)
    264     {
    265       JacobiRotation<Scalar> g;
    266       g.makeGivens(mat(i,i), -temp(i), &mat(i,i));
    267 
    268       Index rs = n-i-1;
    269       if(rs>0)
    270       {
    271         ColXprSegment x(mat.col(i).tail(rs));
    272         TempVecSegment y(temp.tail(rs));
    273         apply_rotation_in_the_plane(x, y, g);
    274       }
    275     }
    276   }
    277   else
    278   {
    279     temp = vec;
    280     RealScalar beta = 1;
    281     for(Index j=0; j<n; ++j)
    282     {
    283       RealScalar Ljj = numext::real(mat.coeff(j,j));
    284       RealScalar dj = numext::abs2(Ljj);
    285       Scalar wj = temp.coeff(j);
    286       RealScalar swj2 = sigma*numext::abs2(wj);
    287       RealScalar gamma = dj*beta + swj2;
    288 
    289       RealScalar x = dj + swj2/beta;
    290       if (x<=RealScalar(0))
    291         return j;
    292       RealScalar nLjj = sqrt(x);
    293       mat.coeffRef(j,j) = nLjj;
    294       beta += swj2/dj;
    295 
    296       // Update the terms of L
    297       Index rs = n-j-1;
    298       if(rs)
    299       {
    300         temp.tail(rs) -= (wj/Ljj) * mat.col(j).tail(rs);
    301         if(gamma != 0)
    302           mat.col(j).tail(rs) = (nLjj/Ljj) * mat.col(j).tail(rs) + (nLjj * sigma*numext::conj(wj)/gamma)*temp.tail(rs);
    303       }
    304     }
    305   }
    306   return -1;
    307 }
    308 
    309 template<typename Scalar> struct llt_inplace<Scalar, Lower>
    310 {
    311   typedef typename NumTraits<Scalar>::Real RealScalar;
    312   template<typename MatrixType>
    313   static Index unblocked(MatrixType& mat)
    314   {
    315     using std::sqrt;
    316 
    317     eigen_assert(mat.rows()==mat.cols());
    318     const Index size = mat.rows();
    319     for(Index k = 0; k < size; ++k)
    320     {
    321       Index rs = size-k-1; // remaining size
    322 
    323       Block<MatrixType,Dynamic,1> A21(mat,k+1,k,rs,1);
    324       Block<MatrixType,1,Dynamic> A10(mat,k,0,1,k);
    325       Block<MatrixType,Dynamic,Dynamic> A20(mat,k+1,0,rs,k);
    326 
    327       RealScalar x = numext::real(mat.coeff(k,k));
    328       if (k>0) x -= A10.squaredNorm();
    329       if (x<=RealScalar(0))
    330         return k;
    331       mat.coeffRef(k,k) = x = sqrt(x);
    332       if (k>0 && rs>0) A21.noalias() -= A20 * A10.adjoint();
    333       if (rs>0) A21 /= x;
    334     }
    335     return -1;
    336   }
    337 
    338   template<typename MatrixType>
    339   static Index blocked(MatrixType& m)
    340   {
    341     eigen_assert(m.rows()==m.cols());
    342     Index size = m.rows();
    343     if(size<32)
    344       return unblocked(m);
    345 
    346     Index blockSize = size/8;
    347     blockSize = (blockSize/16)*16;
    348     blockSize = (std::min)((std::max)(blockSize,Index(8)), Index(128));
    349 
    350     for (Index k=0; k<size; k+=blockSize)
    351     {
    352       // partition the matrix:
    353       //       A00 |  -  |  -
    354       // lu  = A10 | A11 |  -
    355       //       A20 | A21 | A22
    356       Index bs = (std::min)(blockSize, size-k);
    357       Index rs = size - k - bs;
    358       Block<MatrixType,Dynamic,Dynamic> A11(m,k,   k,   bs,bs);
    359       Block<MatrixType,Dynamic,Dynamic> A21(m,k+bs,k,   rs,bs);
    360       Block<MatrixType,Dynamic,Dynamic> A22(m,k+bs,k+bs,rs,rs);
    361 
    362       Index ret;
    363       if((ret=unblocked(A11))>=0) return k+ret;
    364       if(rs>0) A11.adjoint().template triangularView<Upper>().template solveInPlace<OnTheRight>(A21);
    365       if(rs>0) A22.template selfadjointView<Lower>().rankUpdate(A21,typename NumTraits<RealScalar>::Literal(-1)); // bottleneck
    366     }
    367     return -1;
    368   }
    369 
    370   template<typename MatrixType, typename VectorType>
    371   static Index rankUpdate(MatrixType& mat, const VectorType& vec, const RealScalar& sigma)
    372   {
    373     return Eigen::internal::llt_rank_update_lower(mat, vec, sigma);
    374   }
    375 };
    376 
    377 template<typename Scalar> struct llt_inplace<Scalar, Upper>
    378 {
    379   typedef typename NumTraits<Scalar>::Real RealScalar;
    380 
    381   template<typename MatrixType>
    382   static EIGEN_STRONG_INLINE Index unblocked(MatrixType& mat)
    383   {
    384     Transpose<MatrixType> matt(mat);
    385     return llt_inplace<Scalar, Lower>::unblocked(matt);
    386   }
    387   template<typename MatrixType>
    388   static EIGEN_STRONG_INLINE Index blocked(MatrixType& mat)
    389   {
    390     Transpose<MatrixType> matt(mat);
    391     return llt_inplace<Scalar, Lower>::blocked(matt);
    392   }
    393   template<typename MatrixType, typename VectorType>
    394   static Index rankUpdate(MatrixType& mat, const VectorType& vec, const RealScalar& sigma)
    395   {
    396     Transpose<MatrixType> matt(mat);
    397     return llt_inplace<Scalar, Lower>::rankUpdate(matt, vec.conjugate(), sigma);
    398   }
    399 };
    400 
    401 template<typename MatrixType> struct LLT_Traits<MatrixType,Lower>
    402 {
    403   typedef const TriangularView<const MatrixType, Lower> MatrixL;
    404   typedef const TriangularView<const typename MatrixType::AdjointReturnType, Upper> MatrixU;
    405   static inline MatrixL getL(const MatrixType& m) { return MatrixL(m); }
    406   static inline MatrixU getU(const MatrixType& m) { return MatrixU(m.adjoint()); }
    407   static bool inplace_decomposition(MatrixType& m)
    408   { return llt_inplace<typename MatrixType::Scalar, Lower>::blocked(m)==-1; }
    409 };
    410 
    411 template<typename MatrixType> struct LLT_Traits<MatrixType,Upper>
    412 {
    413   typedef const TriangularView<const typename MatrixType::AdjointReturnType, Lower> MatrixL;
    414   typedef const TriangularView<const MatrixType, Upper> MatrixU;
    415   static inline MatrixL getL(const MatrixType& m) { return MatrixL(m.adjoint()); }
    416   static inline MatrixU getU(const MatrixType& m) { return MatrixU(m); }
    417   static bool inplace_decomposition(MatrixType& m)
    418   { return llt_inplace<typename MatrixType::Scalar, Upper>::blocked(m)==-1; }
    419 };
    420 
    421 } // end namespace internal
    422 
    423 /** Computes / recomputes the Cholesky decomposition A = LL^* = U^*U of \a matrix
    424   *
    425   * \returns a reference to *this
    426   *
    427   * Example: \include TutorialLinAlgComputeTwice.cpp
    428   * Output: \verbinclude TutorialLinAlgComputeTwice.out
    429   */
    430 template<typename MatrixType, int _UpLo>
    431 template<typename InputType>
    432 LLT<MatrixType,_UpLo>& LLT<MatrixType,_UpLo>::compute(const EigenBase<InputType>& a)
    433 {
    434   check_template_parameters();
    435 
    436   eigen_assert(a.rows()==a.cols());
    437   const Index size = a.rows();
    438   m_matrix.resize(size, size);
    439   if (!internal::is_same_dense(m_matrix, a.derived()))
    440     m_matrix = a.derived();
    441 
    442   // Compute matrix L1 norm = max abs column sum.
    443   m_l1_norm = RealScalar(0);
    444   // TODO move this code to SelfAdjointView
    445   for (Index col = 0; col < size; ++col) {
    446     RealScalar abs_col_sum;
    447     if (_UpLo == Lower)
    448       abs_col_sum = m_matrix.col(col).tail(size - col).template lpNorm<1>() + m_matrix.row(col).head(col).template lpNorm<1>();
    449     else
    450       abs_col_sum = m_matrix.col(col).head(col).template lpNorm<1>() + m_matrix.row(col).tail(size - col).template lpNorm<1>();
    451     if (abs_col_sum > m_l1_norm)
    452       m_l1_norm = abs_col_sum;
    453   }
    454 
    455   m_isInitialized = true;
    456   bool ok = Traits::inplace_decomposition(m_matrix);
    457   m_info = ok ? Success : NumericalIssue;
    458 
    459   return *this;
    460 }
    461 
    462 /** Performs a rank one update (or dowdate) of the current decomposition.
    463   * If A = LL^* before the rank one update,
    464   * then after it we have LL^* = A + sigma * v v^* where \a v must be a vector
    465   * of same dimension.
    466   */
    467 template<typename _MatrixType, int _UpLo>
    468 template<typename VectorType>
    469 LLT<_MatrixType,_UpLo> & LLT<_MatrixType,_UpLo>::rankUpdate(const VectorType& v, const RealScalar& sigma)
    470 {
    471   EIGEN_STATIC_ASSERT_VECTOR_ONLY(VectorType);
    472   eigen_assert(v.size()==m_matrix.cols());
    473   eigen_assert(m_isInitialized);
    474   if(internal::llt_inplace<typename MatrixType::Scalar, UpLo>::rankUpdate(m_matrix,v,sigma)>=0)
    475     m_info = NumericalIssue;
    476   else
    477     m_info = Success;
    478 
    479   return *this;
    480 }
    481 
    482 #ifndef EIGEN_PARSED_BY_DOXYGEN
    483 template<typename _MatrixType,int _UpLo>
    484 template<typename RhsType, typename DstType>
    485 void LLT<_MatrixType,_UpLo>::_solve_impl(const RhsType &rhs, DstType &dst) const
    486 {
    487   _solve_impl_transposed<true>(rhs, dst);
    488 }
    489 
    490 template<typename _MatrixType,int _UpLo>
    491 template<bool Conjugate, typename RhsType, typename DstType>
    492 void LLT<_MatrixType,_UpLo>::_solve_impl_transposed(const RhsType &rhs, DstType &dst) const
    493 {
    494     dst = rhs;
    495 
    496     matrixL().template conjugateIf<!Conjugate>().solveInPlace(dst);
    497     matrixU().template conjugateIf<!Conjugate>().solveInPlace(dst);
    498 }
    499 #endif
    500 
    501 /** \internal use x = llt_object.solve(x);
    502   *
    503   * This is the \em in-place version of solve().
    504   *
    505   * \param bAndX represents both the right-hand side matrix b and result x.
    506   *
    507   * This version avoids a copy when the right hand side matrix b is not needed anymore.
    508   *
    509   * \warning The parameter is only marked 'const' to make the C++ compiler accept a temporary expression here.
    510   * This function will const_cast it, so constness isn't honored here.
    511   *
    512   * \sa LLT::solve(), MatrixBase::llt()
    513   */
    514 template<typename MatrixType, int _UpLo>
    515 template<typename Derived>
    516 void LLT<MatrixType,_UpLo>::solveInPlace(const MatrixBase<Derived> &bAndX) const
    517 {
    518   eigen_assert(m_isInitialized && "LLT is not initialized.");
    519   eigen_assert(m_matrix.rows()==bAndX.rows());
    520   matrixL().solveInPlace(bAndX);
    521   matrixU().solveInPlace(bAndX);
    522 }
    523 
    524 /** \returns the matrix represented by the decomposition,
    525  * i.e., it returns the product: L L^*.
    526  * This function is provided for debug purpose. */
    527 template<typename MatrixType, int _UpLo>
    528 MatrixType LLT<MatrixType,_UpLo>::reconstructedMatrix() const
    529 {
    530   eigen_assert(m_isInitialized && "LLT is not initialized.");
    531   return matrixL() * matrixL().adjoint().toDenseMatrix();
    532 }
    533 
    534 /** \cholesky_module
    535   * \returns the LLT decomposition of \c *this
    536   * \sa SelfAdjointView::llt()
    537   */
    538 template<typename Derived>
    539 inline const LLT<typename MatrixBase<Derived>::PlainObject>
    540 MatrixBase<Derived>::llt() const
    541 {
    542   return LLT<PlainObject>(derived());
    543 }
    544 
    545 /** \cholesky_module
    546   * \returns the LLT decomposition of \c *this
    547   * \sa SelfAdjointView::llt()
    548   */
    549 template<typename MatrixType, unsigned int UpLo>
    550 inline const LLT<typename SelfAdjointView<MatrixType, UpLo>::PlainObject, UpLo>
    551 SelfAdjointView<MatrixType, UpLo>::llt() const
    552 {
    553   return LLT<PlainObject,UpLo>(m_matrix);
    554 }
    555 
    556 } // end namespace Eigen
    557 
    558 #endif // EIGEN_LLT_H